STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q338F8_ORYSJOs10g0406800 protein. (345 aa)    
Predicted Functional Partners:
Q6Z7B7_ORYSJ
Os02g0114700 protein; Belongs to the NOB1 family.
   
  
 0.915
Q7XTH1_ORYSJ
tRNA (adenine(58)-N(1))-methyltransferase.
   
   0.902
Q0DGP5_ORYSJ
Os05g0519500 protein.
   
   0.898
Q94GP6_ORYSJ
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
    0.896
B7EZK3_ORYSJ
cDNA clone:002-114-D09, full insert sequence.
   
    0.875
OsJ_01990
Ribosome production factor 2 homolog.
   
    0.875
Q6EQN5_ORYSJ
Os09g0352400 protein.
   
    0.874
Q0JAK5_ORYSJ
cDNA clone:J033052D05, full insert sequence.
   
    0.872
B7F8R5_ORYSJ
cDNA, clone: J065152D03, full insert sequence.
   
    0.871
Q6ZJR6_ORYSJ
cDNA clone:001-034-F07, full insert sequence.
   
    0.871
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.