STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOX8Homeobox-leucine zipper protein HOX8; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class I subfamily. (305 aa)    
Predicted Functional Partners:
OSH10
Homeobox protein knotted-1-like 4.
    
 
 0.552
OSH3
Homeobox protein knotted-1-like 7; Probable transcription factor that may be involved in shoot formation during embryogenesis; Belongs to the TALE/KNOX homeobox family.
    
 
 0.466
OSH6
Homeobox protein knotted-1-like 1; Probable transcription factor that may be involved in shoot formation during early embryogenesis.
    
 
 0.434
OSH15
Homeobox protein knotted-1-like 12; Probable transcription factor that may be involved in shoot formation during embryogenesis; Belongs to the TALE/KNOX homeobox family.
    
 
 0.407
OSH71
Homeobox protein knotted-1-like 10; Probable transcription factor that may be involved in shoot formation during embryogenesis.
    
 
 0.403
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.