STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q339G6_ORYSJtRNA (guanine(26)-N(2))-dimethyltransferase. (555 aa)    
Predicted Functional Partners:
B7EZK3_ORYSJ
cDNA clone:002-114-D09, full insert sequence.
   
  
 0.891
Q7XQC2_ORYSJ
tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6; Substrate-binding subunit of tRNA (adenine-N1-)- methyltransferase, which catalyzes the formation of N1-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
  
 0.868
Q0JAK5_ORYSJ
cDNA clone:J033052D05, full insert sequence.
   
    0.865
OsJ_20740
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
 
 0.858
Q0DGP5_ORYSJ
Os05g0519500 protein.
   
 
 0.851
Q0IPS3_ORYSJ
Os12g0170700 protein.
   
  
 0.822
PES
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
  
 0.811
Q656B0_ORYSJ
cDNA clone:J033145O08, full insert sequence.
   
 
 0.803
Q0DS53_ORYSJ
Os03g0333100 protein.
   
  
 0.788
B7F947_ORYSJ
cDNA, clone: J075009F20, full insert sequence.
   
    0.787
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.