STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q53KR5_ORYSJOs11g0237400 protein. (76 aa)    
Predicted Functional Partners:
A0A0P0V1K5
Os01g0276200 protein.
   
 0.960
Q10M45_ORYSJ
Mitochondrial import receptor subunit TOM40, putative, expressed.
   
 0.960
B7ECH1_ORYSJ
cDNA clone:J013071M22, full insert sequence.
   
 0.873
Q2QYV1_ORYSJ
Outer membrane protein, OMP85 family protein, expressed.
   
 0.873
Q6ATX4_ORYSJ
Os05g0470800 protein.
   
 0.873
Q10NZ2_ORYSJ
Os03g0253800 protein.
   
 
 0.847
Q6L543_ORYSJ
cDNA clone:002-107-B04, full insert sequence.
   
 0.838
Q69V11_ORYSJ
cDNA clone:J013040N20, full insert sequence.
    
 
 0.773
B7F8R2_ORYSJ
cDNA, clone: J065147F17, full insert sequence.
   
 
 0.770
TIM9
Mitochondrial import inner membrane translocase subunit Tim9; Mitochondrial intermembrane chaperone that participates in the import and insertion of multi-pass transmembrane proteins into the mitochondrial inner membrane. May also be required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space (By similarity); Belongs to the small Tim family.
   
 
 0.770
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.