STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5JK69_ORYSJOs01g0957900 protein. (1176 aa)    
Predicted Functional Partners:
B9FC62_ORYSJ
Os04g0585300 protein.
   
 
 0.994
Q0DGP5_ORYSJ
Os05g0519500 protein.
   
 
 0.994
Q0DQG5_ORYSJ
Os03g0598200 protein.
   
 
 0.994
Q53MQ7_ORYSJ
cDNA clone:J013157I04, full insert sequence.
   
 
 0.994
Q6EQN5_ORYSJ
Os09g0352400 protein.
   
 
 0.994
Q5N820_ORYSJ
cDNA clone:J033030B16, full insert sequence.
   
 
 0.987
Q6Z568_ORYSJ
cDNA clone:001-031-A04, full insert sequence.
   
 
 0.980
Q6YU01_ORYSJ
cDNA clone:J033034O16, full insert sequence.
   
 
 0.979
C7IWK2_ORYSJ
Os01g0581900 protein.
   
 
 0.977
Q10LM2_ORYSJ
Utp14 protein, expressed.
   
 
 0.977
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.