STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBD1Bifunctional nuclease 1; Bifunctional nuclease with both RNase and DNase activities. Involved in basal defense response. Participates in abscisic acid- derived callose deposition following infection by a necrotrophic pathogen. (331 aa)    
Predicted Functional Partners:
A0A0P0VC43
Os01g0916200 protein.
    
 0.595
Q0DWN8_ORYSJ
Os02g0805000 protein.
    
 0.595
Q5WAB3_ORYSJ
AP-1 complex subunit gamma.
    
 0.595
A0A0P0XY01
Os11g0104866 protein.
     
 0.575
A0A0P0Y653
Os12g0104766 protein.
     
 0.575
CLH2_ORYSJ
Clathrin heavy chain 2; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.
     
 0.575
CLH1_ORYSJ
Clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.
     
 0.575
BBD2
Bifunctional nuclease 2; Bifunctional nuclease with both RNase and DNase activities. Involved in basal defense response. Participates in abscisic acid- derived callose deposition following infection by a necrotrophic pathogen (By similarity); Belongs to the bifunctional nuclease family.
  
  
0.566
Q10CG6_ORYSJ
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.564
Q6ATS1_ORYSJ
BRCA1 C Terminus domain containing protein, expressed.
     
 0.564
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.