STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5N9U6_ORYSJcDNA clone:001-030-E07, full insert sequence. (268 aa)    
Predicted Functional Partners:
A0A0P0XY01
Os11g0104866 protein.
    
 0.951
A0A0P0Y653
Os12g0104766 protein.
    
 0.951
CLH2_ORYSJ
Clathrin heavy chain 2; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.
    
 0.951
CLH1_ORYSJ
Clathrin heavy chain 1; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.
    
 0.951
Q6K8F1_ORYSJ
cDNA clone:J013110A10, full insert sequence.
     
 
0.936
Q7XTR7_ORYSJ
cDNA clone:J033087C14, full insert sequence.
     
 
0.936
A0A0P0VSF7
Os03g0112101 protein.
   
 0.934
Q0DVU5_ORYSJ
Os03g0112400 protein.
   
 0.934
Q5JNC7_ORYSJ
Os01g0738600 protein.
     
 
0.926
A0A0P0X1C3
Os06g0728600 protein.
   
 0.910
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.