STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5NBM2_ORYSJcDNA clone:J023019E21, full insert sequence. (420 aa)    
Predicted Functional Partners:
Q69LD2_ORYSJ
cDNA clone:001-202-D07, full insert sequence.
     
 0.869
Q2QRA2_ORYSJ
cDNA clone:006-202-A01, full insert sequence.
   
 
  0.848
OJ1611_C08.26
Putative D-cysteine desulfhydrase 1, mitochondrial; Catalyzes the production of hydrogen sulfide (H2S) from cysteine; Belongs to the ACC deaminase/D-cysteine desulfhydrase family.
   
 
  0.848
Q0E4Q5_ORYSJ
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
     
 0.797
Q5Z8I2_ORYSJ
Os06g0694700 protein.
     
 0.797
Q9LWZ6_ORYSJ
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
     
 0.797
Q0J0H3_ORYSJ
cDNA clone:J013110D20, full insert sequence.
     
 0.679
OsJ_29962
Pyruvate dehydrogenase E1 component subunit beta-2, mitochondrial; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).
     
 0.679
OsJ_11888
Pyruvate dehydrogenase E1 component subunit beta-4, chloroplastic; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).
     
 0.679
ODPB3_ORYSJ
Pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).
     
 0.679
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (22%) [HD]