STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5Z4P5_ORYSJcDNA, clone: J065155L01, full insert sequence. (153 aa)    
Predicted Functional Partners:
B9GBN5_ORYSJ
Os12g0127100 protein.
    
 0.896
Q2RB11_ORYSJ
Nse1 non-SMC component of SMC5-6 complex family protein, expressed.
    
 0.896
A0A0P0XJA8
Os09g0121050 protein.
    
 0.885
B7EZI6_ORYSJ
cDNA clone:002-113-D11, full insert sequence.
    
 0.885
A0A0N7KD76
Os01g0578700 protein.
    
 0.884
Q6AUG5_ORYSJ
cDNA clone:J033106F17, full insert sequence.
    
 0.884
A0A0P0VFZ5
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.872
Q69XQ4_ORYSJ
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.872
Q7EXY7_ORYSJ
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.872
A0A0P0Y3H7
Os11g0577200 protein.
    
 0.815
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.