STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5Z6Y0_ORYSJcDNA, clone: J100052L04, full insert sequence. (183 aa)    
Predicted Functional Partners:
HMA3
Cadmium/zinc-transporting ATPase HMA3; Root-specific cadmium (Cd) transporter that mediates Cd efflux in root vacuoles. Involved in Cd detoxification by sequestrating Cd into root vacuoles and limiting translocation of Cd from the roots to the shoots, and accumulation in grains.
   
 0.553
A0A0N7KES2
Os02g0172600 protein.
    
 0.552
A0A0P0VTT2
Os03g0178100 protein.
    
 0.552
HMA9
Cation-transporting ATPase HMA5; Metal efflux transporter that may play a role in detoxification of heavy metals, such as zinc, copper, lead and cadmium, especially in the shoots.
    
 0.552
A0A0P0X0R1
Os06g0690800 protein.
    
 0.552
HMA5
Copper-transporting ATPase HMA5; Copper (Cu) transporter that plays an essential role in promoting translocation of Cu from roots to shoots. Involved in loading Cu to the xylem of the roots and other organs, including panicles. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
    
 0.552
HMA2
Cadmium/zinc-transporting ATPase HMA2; Zinc/cadmium transporter that plays an essential role in promoting translocation of zinc and cadmium from roots to shoots. May control cadmium loading into xylem. In roots, transports zinc and cadmium from the apoplast to the symplast to facilitate translocation via the phloem. In nodes, functions to load zinc and cadmium to the phloem for the preferential distribution to the upper nodes and panicles. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
    
 0.552
Q0J4V8_ORYSJ
Os08g0486100 protein.
    
 0.552
Q5N954_ORYSJ
Os01g0869100 protein.
    
 0.552
Q5ZC30_ORYSJ
Os01g0362900 protein.
    
 0.552
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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