STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5ZA96_ORYSJOs06g0320700 protein. (626 aa)    
Predicted Functional Partners:
LIP1-2
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
    
  0.840
LIP1P-1
Lipoyl synthase 1, chloroplastic; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
    
  0.668
LIP1P-2
Lipoyl synthase 2, chloroplastic; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
    
  0.668
MSRB1
Peptide methionine sulfoxide reductase B1, chloroplastic; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Involved in abiotic stress response. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R-enantiomer.
  
  
 0.596
P0696G06.11
cDNA clone:J033125C09, full insert sequence.
      
 0.505
Q10MY7_ORYSJ
Protein YIPF.
      
 0.493
Q6ASS1_ORYSJ
cDNA clone:001-123-E09, full insert sequence.
      
 0.493
Q10R10_ORYSJ
Hydrolase, carbon-nitrogen family protein, expressed.
  
  
 0.490
Q0JFE3_ORYSJ
Os04g0110600 protein.
      
 0.489
OsJ_12008
Protein PEP-RELATED DEVELOPMENT ARRESTED 1 homolog, chloroplastic; Plays an essential role in early steps of chloroplast development. May be involved in the redox control of plastid gene expression by maintening the redox state around chloroplast nucleoids. May positively regulate plastid-encoded RNA polymerase (PEP) activity.
      
 0.481
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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