STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q651F0_ORYSJOs09g0539100 protein. (443 aa)    
Predicted Functional Partners:
Q6YTT3_ORYSJ
Phospho-2-dehydro-3-deoxyheptonate aldolase.
  
 0.967
DAHPS1
Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic.
  
 0.967
DAHPS2
Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic.
  
 0.967
Q336R7_ORYSJ
Phospho-2-dehydro-3-deoxyheptonate aldolase.
  
 0.966
Q0IMW8_ORYSJ
Os12g0534000 protein.
   
 
 0.963
A0A0P0V319
Os01g0375500 protein.
   
 
 0.944
Q5ZCV1_ORYSJ
Os01g0375200 protein.
   
 
 0.944
Q10NY1_ORYSJ
Chorismate synthase.
  
 
 0.927
A0A0P0V2P3
Os01g0375350 protein.
   
 
 0.900
Q6H819_ORYSJ
Chorismate mutase.
  
 
 0.863
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.