STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q65XH1_ORYSJcDNA clone:J033148I18, full insert sequence. (819 aa)    
Predicted Functional Partners:
A0A0P0V8W3
Os01g0777000 protein.
    
 0.999
A0A0P0WZV8
Os06g0669600 protein.
   
 0.999
Q0DTU0_ORYSJ
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.999
Q6ZLF0_ORYSJ
Os08g0451000 protein.
   
 0.999
Q84LH7_ORYSJ
Brefeldin A-sensitive Golgi protein, putative, expressed.
  
 
 0.999
Q6K3A8_ORYSJ
Os02g0456000 protein.
    
 0.998
Q2QP91_ORYSJ
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.989
A0A0P0XZ20
Os11g0157701 protein.
    
 0.975
Q2QXE9_ORYSJ
cDNA clone:J013000A01, full insert sequence.
    
 0.975
Q9LGF8_ORYSJ
cDNA clone:002-103-B08, full insert sequence; Belongs to the syntaxin family.
     
 0.876
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.