STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
BHLH062Transcription factor BHLH062; Transcription factor that plays a positive role in salt stress tolerance. Interacts with TIFY11A/JAZ9 and binds to the promoter of some potassium ion transporter genes to regulate potassium homeostasis during salt stress. (265 aa)    
Predicted Functional Partners:
TIFY11A
Protein TIFY 11a; Repressor of jasmonate (JA) responses. Forms a ternary complex with RSS3 and BHLH94 to negatively regulate JA-responsive genes. Acts as positive regulator of tolerance to salt stress. Involved in salt tolerance by modulating potassium homeostasis through JA signaling and regulation of the expression of potassium ion transporter genes. Acts as a transcriptional regulator targeted by the SCF(COI1) E3 ubiquitin ligase complexes in the JA signaling pathway, and interacts with BHLH062 that may directly regulate the ion transporter genes. Acts as positive regulator of toler [...]
      
 0.970
TIFY6A
Protein TIFY 6a; Repressor of jasmonate responses.
      
 0.960
NINJA1
Protein NINJA homolog 1; Belongs to the Ninja family.
      
 0.796
Q5SN79_ORYSJ
cDNA clone:J013158F22, full insert sequence.
   
  
 0.535
HAK21
Potassium transporter 21; High-affinity potassium transporter; Belongs to the HAK/KUP transporter (TC 2.A.72.3) family.
    
 
 0.466
Q75LM0_ORYSJ
Oligopeptide transporter 3, putative, expressed.
   
  
 0.461
BHLH148
Transcription factor BHLH148; May act on an initial response of jasmonate-regulated gene expression toward drought tolerance as part of a BHLH148-TIFY11D/JAZ12- COI1A complex.
      
 0.444
NAS3
Nicotianamine synthase 3; Synthesizes nicotianamine, a polyamine that is the first intermediate in the synthesis of the phytosiderophores of the mugineic acid type found in gramineae which serve as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron; Belongs to the nicotianamine synthase (NAS)-like family.
    
 
 0.400
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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