STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P0012B02.3-1Ribose-phosphate pyrophosphokinase 2, chloroplastic. (399 aa)    
Predicted Functional Partners:
P0482F12.28-1
Ribose-phosphate pyrophosphokinase 1, chloroplastic; Belongs to the ribose-phosphate pyrophosphokinase family.
  
  
0.938
Q652S1_ORYSJ
cDNA clone:J013116E07, full insert sequence.
  
 
 0.937
A3AD51_ORYSJ
Os03g0100040 protein.
  
  
 
0.935
OJ1006F06.12
ATP phosphoribosyltransferase, chloroplastic; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP); Belongs to the ATP phosphoribosyltransferase family. Long subfamily.
  
 
 0.916
Q6I5V5_ORYSJ
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 0.914
Q0DEU8_ORYSJ
Os06g0133800 protein.
   
 
 0.911
Q0JHB3_ORYSJ
Os01g0873100 protein.
  
 0.911
Q7XWP9_ORYSJ
cDNA clone:J023019B19, full insert sequence.
   
 
 0.911
Q7XVP0_ORYSJ
cDNA clone:J033129E13, full insert sequence.
  
 
 0.906
UMPS2
Orotidine 5'-phosphate decarboxylase; In the N-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 
 0.903
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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