STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OsJ_12466Zinc finger BED domain-containing protein RICESLEEPER 2; Transposase-like protein that is essential for plant growth and development. May regulate global gene expression by recruiting other cellular factors. (722 aa)    
Predicted Functional Partners:
Q10BC8_ORYSJ
HAT family dimerisation domain containing protein, expressed.
  
 
 
 0.608
Q0JPH5_ORYSJ
cDNA clone:J013170M12, full insert sequence.
  
 
 
 0.581
Q0IZD0_ORYSJ
Os10g0104700 protein.
  
 
 
 0.546
Q0DAT1_ORYSJ
cDNA clone:J033026P12, full insert sequence.
  
 
 
 0.542
Q0E362_ORYSJ
cDNA clone:J033000H11, full insert sequence.
  
 
 
 0.541
Q0J0T2_ORYSJ
Os09g0499600 protein.
  
 
 
 0.536
A0A0P0Y2R1
Os11g0500100 protein.
  
 
   0.485
Q2QVL7_ORYSJ
Transposon protein, putative, unclassified, expressed.
  
     0.481
A0A0P0V7K5
Os01g0722550 protein.
  
 
   0.479
Q5VNQ7_ORYSJ
Os01g0379800 protein.
  
 
   0.477
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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