Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0P0VVP8 | A0A0P0WHC1 | A0A0P0VVP8 | A0A0P0WHC1 | Os03g0259500 protein. | Os05g0122400 protein. | 0.779 |
A0A0P0VVP8 | Q0DHI3_ORYSJ | A0A0P0VVP8 | Q0DHI3 | Os03g0259500 protein. | Os05g0463900 protein. | 0.779 |
A0A0P0VVP8 | Q0E4T3_ORYSJ | A0A0P0VVP8 | Q0E4T3 | Os03g0259500 protein. | Os02g0101700 protein. | 0.769 |
A0A0P0VVP8 | Q6ESW6_ORYSJ | A0A0P0VVP8 | Q6ESW6 | Os03g0259500 protein. | Os02g0242600 protein. | 0.496 |
A0A0P0VVP8 | Q9FWV0_ORYSJ | A0A0P0VVP8 | Q9FWV0 | Os03g0259500 protein. | Ubiquitin fusion protein, putative, expressed. | 0.980 |
A0A0P0VVP8 | RPS27AA | A0A0P0VVP8 | Q9ARZ9 | Os03g0259500 protein. | Ubiquitin-40S ribosomal protein S27a-1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] | 0.980 |
A0A0P0VVP8 | RPS27AB | A0A0P0VVP8 | P51431 | Os03g0259500 protein. | Ubiquitin-40S ribosomal protein S27a-2; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] | 0.980 |
A0A0P0WHC1 | A0A0P0VVP8 | A0A0P0WHC1 | A0A0P0VVP8 | Os05g0122400 protein. | Os03g0259500 protein. | 0.779 |
A0A0P0WHC1 | A0A0P0X666 | A0A0P0WHC1 | A0A0P0X666 | Os05g0122400 protein. | Os07g0493033 protein. | 0.779 |
A0A0P0WHC1 | A0A0P0X6U8 | A0A0P0WHC1 | A0A0P0X6U8 | Os05g0122400 protein. | Os07g0489500 protein. | 0.779 |
A0A0P0WHC1 | Q0DHI3_ORYSJ | A0A0P0WHC1 | Q0DHI3 | Os05g0122400 protein. | Os05g0463900 protein. | 0.999 |
A0A0P0WHC1 | Q0E4T3_ORYSJ | A0A0P0WHC1 | Q0E4T3 | Os05g0122400 protein. | Os02g0101700 protein. | 0.999 |
A0A0P0WHC1 | Q6ESW6_ORYSJ | A0A0P0WHC1 | Q6ESW6 | Os05g0122400 protein. | Os02g0242600 protein. | 0.534 |
A0A0P0WHC1 | Q9FWV0_ORYSJ | A0A0P0WHC1 | Q9FWV0 | Os05g0122400 protein. | Ubiquitin fusion protein, putative, expressed. | 0.918 |
A0A0P0WHC1 | RPS27AA | A0A0P0WHC1 | Q9ARZ9 | Os05g0122400 protein. | Ubiquitin-40S ribosomal protein S27a-1; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] | 0.918 |
A0A0P0WHC1 | RPS27AB | A0A0P0WHC1 | P51431 | Os05g0122400 protein. | Ubiquitin-40S ribosomal protein S27a-2; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is invol [...] | 0.918 |
A0A0P0WHC1 | Ub-CEP52-1 | A0A0P0WHC1 | P0CH34 | Os05g0122400 protein. | Ubiquitin-60S ribosomal protein L40-1; [Ubiquitin]: exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is inv [...] | 0.779 |
A0A0P0X666 | A0A0P0WHC1 | A0A0P0X666 | A0A0P0WHC1 | Os07g0493033 protein. | Os05g0122400 protein. | 0.779 |
A0A0P0X666 | Q0DHI3_ORYSJ | A0A0P0X666 | Q0DHI3 | Os07g0493033 protein. | Os05g0463900 protein. | 0.779 |
A0A0P0X666 | Q0E4T3_ORYSJ | A0A0P0X666 | Q0E4T3 | Os07g0493033 protein. | Os02g0101700 protein. | 0.769 |
page 1 of 5