STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6H4P7_ORYSJcDNA clone:J013169D12, full insert sequence; Belongs to the class-I aminoacyl-tRNA synthetase family. (1094 aa)    
Predicted Functional Partners:
Q338J4_ORYSJ
Methionyl-tRNA synthetase, putative, expressed; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
P0561B08.33
Probable methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
A0A0P0VFN6
Os02g0183900 protein.
  
 0.991
Q67WM2_ORYSJ
Os06g0645400 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.991
Q8S5M6_ORYSJ
Glutamyl-tRNA synthetase family protein, expressed; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.972
Q9LIZ8_ORYSJ
Os01g0271200 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.972
Q0D8E4_ORYSJ
Os07g0165000 protein.
  
 0.967
Q2QS11_ORYSJ
Bifunctional aminoacyl-tRNA synthetase, putative, expressed.
  
 0.967
Q6ZGC2_ORYSJ
Os02g0778200 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.958
Q5VRX8_ORYSJ
cDNA clone:J013001P05, full insert sequence; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.957
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.