Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0N7KLH2 | A0A0P0V319 | A0A0N7KLH2 | A0A0P0V319 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Os01g0375500 protein. | 0.481 |
A0A0N7KLH2 | Q5ZCV1_ORYSJ | A0A0N7KLH2 | Q5ZCV1 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Os01g0375200 protein. | 0.505 |
A0A0N7KLH2 | Q651F0_ORYSJ | A0A0N7KLH2 | Q651F0 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Os09g0539100 protein. | 0.427 |
A0A0N7KLH2 | Q6H6H8_ORYSJ | A0A0N7KLH2 | Q6H6H8 | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | Os02g0655700 protein. | 0.663 |
A0A0P0V2P3 | Q651F0_ORYSJ | A0A0P0V2P3 | Q651F0 | Os01g0375350 protein. | Os09g0539100 protein. | 0.900 |
A0A0P0V2P3 | Q6H6H8_ORYSJ | A0A0P0V2P3 | Q6H6H8 | Os01g0375350 protein. | Os02g0655700 protein. | 0.663 |
A0A0P0V319 | A0A0N7KLH2 | A0A0P0V319 | A0A0N7KLH2 | Os01g0375500 protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. | 0.481 |
A0A0P0V319 | Q0IMW8_ORYSJ | A0A0P0V319 | Q0IMW8 | Os01g0375500 protein. | Os12g0534000 protein. | 0.911 |
A0A0P0V319 | Q651F0_ORYSJ | A0A0P0V319 | Q651F0 | Os01g0375500 protein. | Os09g0539100 protein. | 0.944 |
A0A0P0V319 | Q6H6H8_ORYSJ | A0A0P0V319 | Q6H6H8 | Os01g0375500 protein. | Os02g0655700 protein. | 0.663 |
A0A0P0VPT7 | Q6H6H8_ORYSJ | A0A0P0VPT7 | Q6H6H8 | Alpha-amylase; Belongs to the glycosyl hydrolase 13 family. | Os02g0655700 protein. | 0.560 |
A0A0P0W356 | Q6H6H8_ORYSJ | A0A0P0W356 | Q6H6H8 | Os03g0756700 protein. | Os02g0655700 protein. | 0.560 |
C7IX29_ORYSJ | C7J057_ORYSJ | C7IX29 | C7J057 | Os01g0932700 protein. | Os03g0860000 protein. | 0.925 |
C7IX29_ORYSJ | Q6H6H8_ORYSJ | C7IX29 | Q6H6H8 | Os01g0932700 protein. | Os02g0655700 protein. | 0.594 |
C7J057_ORYSJ | C7IX29_ORYSJ | C7J057 | C7IX29 | Os03g0860000 protein. | Os01g0932700 protein. | 0.925 |
C7J057_ORYSJ | Q6H6H8_ORYSJ | C7J057 | Q6H6H8 | Os03g0860000 protein. | Os02g0655700 protein. | 0.565 |
Q0IMW8_ORYSJ | A0A0P0V319 | Q0IMW8 | A0A0P0V319 | Os12g0534000 protein. | Os01g0375500 protein. | 0.911 |
Q0IMW8_ORYSJ | Q5ZCV1_ORYSJ | Q0IMW8 | Q5ZCV1 | Os12g0534000 protein. | Os01g0375200 protein. | 0.911 |
Q0IMW8_ORYSJ | Q651F0_ORYSJ | Q0IMW8 | Q651F0 | Os12g0534000 protein. | Os09g0539100 protein. | 0.963 |
Q0IMW8_ORYSJ | Q6H6H8_ORYSJ | Q0IMW8 | Q6H6H8 | Os12g0534000 protein. | Os02g0655700 protein. | 0.663 |
page 1 of 2