STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6H703_ORYSJGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (411 aa)    
Predicted Functional Partners:
TPI
Triosephosphate isomerase, cytosolic; Belongs to the triosephosphate isomerase family.
  
 0.994
Q69K00_ORYSJ
Os09g0535000 protein.
  
 0.992
Q8LR75_ORYSJ
cDNA clone:001-007-G07, full insert sequence.
  
 0.991
Q652S1_ORYSJ
cDNA clone:J013116E07, full insert sequence.
  
 0.989
A0A0P0XUM4
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.978
Q655T1_ORYSJ
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.975
Q7XWP9_ORYSJ
cDNA clone:J023019B19, full insert sequence.
  
 0.975
Q0DEU8_ORYSJ
Os06g0133800 protein.
  
 0.973
Q6H6C7_ORYSJ
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.964
Q6YXI1_ORYSJ
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.964
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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