STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIT4Bifunctional nitrilase/nitrile hydratase NIT4; Highly specific for beta-cyano-L-alanine (Ala(CN)). Low activity with 3-phenylpropionitrile (PPN). Not associated with auxin production but may be involved in cyanide detoxification (By similarity). (362 aa)    
Predicted Functional Partners:
Q7XS58_ORYSJ
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.956
Q6H851_ORYSJ
cDNA clone:001-020-C07, full insert sequence.
  
 
 
0.949
A0A0P0WAX0
Os04g0457500 protein.
  
 
 0.946
Q10H87_ORYSJ
Transposon protein, putative, unclassified, expressed.
  
 
  0.942
A0A0P0UYM7
Os01g0151500 protein.
  
 
 0.919
A0A0P0UYM9
Os01g0151400 protein.
  
 
 0.919
B9ET62_ORYSJ
Os01g0764900 protein.
    
 0.911
A0A0P0V4B0
Os01g0558200 protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.905
Q6ASV4_ORYSJ
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
    
 0.895
Q6YSB2_ORYSJ
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
    
 0.895
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.