STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6K2G7_ORYSJcDNA, clone: J100085H03, full insert sequence. (258 aa)    
Predicted Functional Partners:
Q69IM6_ORYSJ
Os09g0514600 protein.
   
 
 0.954
Q8W317_ORYSJ
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial, putative, expressed; Belongs to the complex I 75 kDa subunit family.
    
 0.950
Q6L4W7_ORYSJ
cDNA clone:006-311-E10, full insert sequence.
   
  0.944
Q8H2T7_ORYSJ
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.944
Q6ZGV9_ORYSJ
cDNA clone:J013037P14, full insert sequence.
    
 
 0.942
nad2
NADH dehydrogenase subunit 2.
    
 
 0.925
Q7XIF7_ORYSJ
Os07g0498300 protein.
    
   0.920
Q6K6A4_ORYSJ
Os02g0816800 protein.
  
   0.918
Q5JMG1_ORYSJ
cDNA clone:001-121-D04, full insert sequence.
   
   0.917
Q653E2_ORYSJ
cDNA clone:001-104-E03, full insert sequence.
   
   0.917
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.