STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6K3R8_ORYSJT-complex protein 1 subunit gamma. (559 aa)    
Predicted Functional Partners:
Q7FAT6_ORYSJ
cDNA clone:J033035C24, full insert sequence.
   
0.999
Q0DG27_ORYSJ
Os05g0556700 protein; Belongs to the TCP-1 chaperonin family.
  
0.998
Q5Z907_ORYSJ
cDNA clone:J013095K16, full insert sequence.
  
0.998
Q6ASR1_ORYSJ
Os05g0147400 protein.
  
0.998
Q6AV23_ORYSJ
T-complex protein 1, beta subunit, putative, expressed.
  
0.998
Q75HJ3_ORYSJ
T-complex protein 1, theta subunit, putative, expressed.
   
0.998
A0A0N7KM09
Os06g0320850 protein.
   
 0.997
B9G737_ORYSJ
Os10g0568200 protein.
   
 0.997
Q0DA00_ORYSJ
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
  
0.997
A0A0P0Y3N7
Os11g0577932 protein.
   
 0.996
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.