STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6K5Z3_ORYSJcDNA clone:J023084J18, full insert sequence. (135 aa)    
Predicted Functional Partners:
A0A0N7KI63
Os03g0786900 protein.
    
 0.993
TRS130
Trafficking protein particle complex II-specific subunit 130 homolog; Specific subunit of the TRAPP II complex, a highly conserved vesicle tethering complex that is required for the proper transport of proteins in post-Golgi trafficking pathways to the growing cell plate in mitotic active cells.
    
 0.993
Q5N9C8_ORYSJ
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.993
Q5QNC8_ORYSJ
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.993
Q651C7_ORYSJ
cDNA clone:001-003-G05, full insert sequence.
    
0.993
Q8GRK9_ORYSJ
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.993
Q6K335_ORYSJ
cDNA clone:001-042-B03, full insert sequence.
   
 0.989
Q7F0A6_ORYSJ
cDNA clone:001-121-D05, full insert sequence.
   
 0.989
B9FRI7_ORYSJ
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.988
Q84NS9_ORYSJ
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.988
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.