STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6K969_ORYSJcDNA clone:001-020-B10, full insert sequence. (378 aa)    
Predicted Functional Partners:
Q69LG7_ORYSJ
cDNA clone:J013146N15, full insert sequence.
 
 0.997
Q6ZD10_ORYSJ
Os08g0342400 protein.
 
 0.997
Q2QYB7_ORYSJ
Homoserine dehydrogenase.
 
 0.996
Q2RB23_ORYSJ
Homoserine dehydrogenase.
 
 0.996
Q0DLR8_ORYSJ
Aspartokinase; Belongs to the aspartokinase family.
  
 0.984
Q5JK18_ORYSJ
cDNA clone:J033004I10, full insert sequence.
  
 0.984
Q6YS33_ORYSJ
cDNA clone:001-042-D10, full insert sequence.
  
 0.984
P0560C03.1
Putative threonine synthase.
     
 0.961
Q8LJJ2_ORYSJ
cDNA clone:006-202-C12, full insert sequence.
     
 0.961
Q8W314_ORYSJ
Threonine dehydratase.
  
 
 0.958
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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