STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6KAB7_ORYSJOs02g0294000 protein. (362 aa)    
Predicted Functional Partners:
Q337J6_ORYSJ
FF domain containing protein, expressed.
   
 0.984
Q69K06_ORYSJ
Os09g0103600 protein.
   
 0.984
A0A0P0VJK6
Os02g0511500 protein.
   
 0.975
Q9AWQ3_ORYSJ
cDNA clone:J023132M16, full insert sequence.
   
 0.966
SSD1
cDNA clone:J023014L15, full insert sequence.
   
 0.960
Q851A1_ORYSJ
cDNA clone:J013052G24, full insert sequence.
   
 0.960
Q851A3_ORYSJ
cDNA clone:006-207-E08, full insert sequence.
   
 0.960
A0A0P0V1B4
Os01g0263600 protein.
   
 0.942
Q0IWN2_ORYSJ
Os10g0498600 protein.
   
 0.942
Q69Y13_ORYSJ
cDNA clone:J013038O15, full insert sequence.
   
 0.939
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.