STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCP2Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity. (380 aa)    
Predicted Functional Partners:
Q9FU90_ORYSJ
cDNA clone:006-304-G04, full insert sequence; Belongs to the CGI121/TPRKB family.
    
 0.995
Q5VP89_ORYSJ
cDNA clone:J013154A14, full insert sequence.
  
 0.994
Q10QC5_ORYSJ
cDNA clone:J013119A09, full insert sequence.
  
 
 0.905
Q6YZF2_ORYSJ
Os08g0531300 protein.
  
 
 0.879
P0460H02.10
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.
    
 0.823
Q6ZJ11_ORYSJ
cDNA clone:006-305-H07, full insert sequence.
    
 0.796
Q2QM99_ORYSJ
Modification methylase, HemK family protein, expressed.
    
 0.698
Q852B9_ORYSJ
cDNA clone:001-032-F02, full insert sequence.
    
 0.698
A0A0P0V8H7
Os01g0757900 protein.
  
 
  0.651
A0A0P0XT88
Os10g0209300 protein.
  
 
  0.651
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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