STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6YWS5_ORYSJOs02g0728700 protein. (366 aa)    
Predicted Functional Partners:
A0A0P0Y7P3
Os12g0166500 protein.
   
 0.999
Q0DQG5_ORYSJ
Os03g0598200 protein.
   
 0.999
OJA1212_C06.1
Putative hepatocellular carcinoma-associated antigen 66.
   
 0.999
Q6ZJR6_ORYSJ
cDNA clone:001-034-F07, full insert sequence.
   
 0.999
Q9LGT2_ORYSJ
cDNA clone:J023063M08, full insert sequence.
   
 0.999
A0A0P0V7B9
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.998
A0A0P0WG07
Os04g0662100 protein.
   
 0.998
A0A0P0WZ76
Os06g0644600 protein.
   
 0.998
B7F947_ORYSJ
cDNA, clone: J075009F20, full insert sequence.
   
 0.998
B9FC62_ORYSJ
Os04g0585300 protein.
   
 0.998
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.