STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6YXW5_ORYSJOs02g0143200 protein. (1035 aa)    
Predicted Functional Partners:
A0A0P0W249
Os03g0711200 protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.753
B9F5R6_ORYSJ
Os03g0200600 protein.
   
 
 0.623
A0A0N7KGJ6
Os03g0138000 protein.
   
 
 0.614
Q2QNH6_ORYSJ
Calmodulin-binding protein MPCBP, putative, expressed.
   
 
 0.614
Q2QZE9_ORYSJ
Calmodulin-binding protein MPCBP, putative, expressed.
   
 
 0.614
Q337L2_ORYSJ
TPR Domain containing protein, expressed.
   
 
 0.614
MCM8
Probable DNA helicase MCM8; Probable DNA helicase that may play a role in DNA repair during meiosis.
   
 
  0.575
OJ1384_A02.2
DNA replication licensing factor MCM6; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells.
   
 
  0.575
A0A0P0XZW3
Os11g0209700 protein.
  
   
 0.547
A0A0N7KI13
Os03g0744675 protein.
  
     0.477
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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