STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KSL5Ent-pimara-8(14),15-diene synthase; Catalyzes the conversion of ent-copalyl diphosphate to ent- pimara-8(14),15-diene. (821 aa)    
Predicted Functional Partners:
CPS1
Ent-copalyl diphosphate synthase 1, chloroplastic; Catalyzes the conversion of geranylgeranyl diphosphate to the gibberellin precursor ent-copalyl diphosphate. Belongs to the terpene synthase family.
  
  
0.659
CYP701A6
Ent-kaurene oxidase 2; Catalyzes three successive oxidations of the 4-methyl group of ent-kaurene giving kaurenoic acid, a key step in gibberellins (GAs) biosynthesis. GAs, which are involved many processes, including stem elongation, play a central role in plant development.
     
 0.553
FPPS1
cDNA clone:001-036-D06, full insert sequence; Belongs to the FPP/GGPP synthase family.
     
 0.515
Q65XM9_ORYSJ
cDNA clone:J023072A14, full insert sequence; Belongs to the FPP/GGPP synthase family.
     
 0.515
Q6ENK5_ORYSJ
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
  
     0.512
CYP701A8
Ent-sandaracopimaradiene 3-hydroxylase; Catalyzes the hydroxylation of ent-sandaracopimaradiene at the C3alpha position to produce ent-3beta-hydroxy-sandaracopimaradiene, an intermediates for the biosynthesis of oryzalexin D and oryzalexin E phytoalexins. Catalyzes the hydroxylation of ent-cassadiene at the C3alpha position to produce 3alpha-hydroxy-ent-cassadiene, which may be an intermediate for the biosynthesis of phytocassane phytoalexins. Catalyzes the hydroxylation of syn-pimaradiene (9-beta-pimara-7,15-diene) at the C3beta position to produce 3-beta-syn-pimaradiene. Can hydroxyl [...]
     
 0.508
CPS4
Syn-copalyl diphosphate synthase; Catalyzes the conversion of geranylgeranyl diphosphate to the phytoalexin precursor syn-copalyl diphosphate.
     
0.495
CYP71Z6
Ent-isokaurene C2/C3-hydroxylase; Enzyme of the diterpenoid metabolism involved in the biosynthesis of antibacterial oryzalides such as phytocassane.
     
 0.477
A0A0N7KEV5
Os02g0197700 protein.
     
 0.461
CPS2
Ent-copalyl diphosphate synthase 2; Catalyzes the conversion of geranylgeranyl diphosphate to the phytoalexin precursor ent-copalyl diphosphate. Belongs to the terpene synthase family.
     
0.453
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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