STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6Z5M6_ORYSJOs02g0722800 protein. (1339 aa)    
Predicted Functional Partners:
Q6K837_ORYSJ
Os02g0805900 protein.
    
 0.984
Q338Z4_ORYSJ
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
   
 0.939
A0A0P0W5Y1
Os03g0837000 protein.
    
 0.938
A0A0P0X8F5
Os07g0595100 protein.
    
 0.938
A0A0P0Y6R4
Os12g0138700 protein.
    
 0.938
Q0IUI3_ORYSJ
Os11g0155000 protein.
    
 0.938
Q2QXH6_ORYSJ
Dcp1-like decapping family protein, expressed.
    
 0.938
Q7XHS7_ORYSJ
cDNA clone:001-037-A01, full insert sequence.
    
 0.938
OsJ_32082
DEAD-box ATP-dependent RNA helicase 12; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping; Belongs to the DEAD box helicase family. DDX6/DHH1 subfamily.
    
 0.893
OJ1112_G03.6-1
DEAD-box ATP-dependent RNA helicase 8; ATP-dependent RNA helicase involved in mRNA turnover, and more specifically in mRNA decapping.
    
 0.893
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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