STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6ZC30_ORYSJOs08g0469000 protein; Belongs to the peptidase A1 family. (448 aa)    
Predicted Functional Partners:
A0A0N7KCX2
Os01g0347600 protein; Belongs to the peptidase C1 family.
   
 0.585
H0212B02.7
Oryzain alpha chain; Belongs to the peptidase C1 family.
   
 0.585
H0818H01.14
Oryzain beta chain; Probable thiol protease.
   
 0.585
Q6L4X7_ORYSJ
Os05g0508300 protein; Belongs to the peptidase C1 family.
   
 0.585
CP1
Cysteine protease 1; Cysteine protease that may play a role in pollen development. May be regulated by the transcription factor UDT1 in developing anthers and play a role in tapetum development. Positively regulated by the transcription factor TDR in developing anthers and may play a role in tapetum programmed cell death (PCD).
   
 0.585
B9GBH9_ORYSJ
Os12g0112200 protein.
    
 0.432
Q0IV51_ORYSJ
Saposin-like type B, region 1 family protein, expressed.
    
 0.432
Q5VQH7_ORYSJ
cDNA clone:J013119N08, full insert sequence.
    
 0.432
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.