STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6ZCV7_ORYSJOs08g0487800 protein. (785 aa)    
Predicted Functional Partners:
A0A0N7KD20
Os01g0512800 protein.
    
 0.991
SGT1
Protein SGT1 homolog; Involved in basal disease resistance to bacterial blight (X.oryzae). May act as positive regulator of basal defense. Probably required for SCF-mediated ubiquitination, by coupling HSP90 to SCF complex for ubiquitination of HSP90 client proteins.
    
 0.991
RAR1
Cysteine and histidine-rich domain-containing protein RAR1; Involved in basal disease resistance to virulent strain of bacterial blight (X.oryzae) and compatible race of rice blast fungus (M.grisea). May act as positive regulator of basal defense. Associates with HSP90 and is essential for the pathogen-associated molecular pattern (PAMP)-triggered immune responses specifically enhanced by RAC1.
   
 0.973
Q69TG8_ORYSJ
cDNA clone:J013134M21, full insert sequence.
  
 0.936
Q6Z6H8_ORYSJ
cDNA clone:J023054M07, full insert sequence.
  
 0.936
A0A0P0W1L4
Os03g0655300 protein.
   
 0.927
OJ1014_E02.2
Uncharacterized protein Os08g0359500; Belongs to the p23/wos2 family.
   
 0.927
Q75M67_ORYSJ
Os03g0381300 protein.
   
 0.927
Q6ZFX8_ORYSJ
Os02g0710900 protein.
   
 0.912
Q5Z9N8_ORYSJ
90 kDa heat shock protein.
  
0.901
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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