STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q75KG9_ORYSJcDNA clone:002-118-E02, full insert sequence. (224 aa)    
Predicted Functional Partners:
B7EFL6_ORYSJ
cDNA clone:J023001D05, full insert sequence.
   
 
 0.865
Q658I1_ORYSJ
cDNA clone:001-017-D12, full insert sequence.
   
 
 0.865
Q8H065_ORYSJ
Mitochondrial ribosomal protein L51/S25/CI-B8 family protein, putative, expressed.
    
   0.799
Q6I600_ORYSJ
cDNA clone:J013153H24, full insert sequence.
   
   0.792
Q6K241_ORYSJ
cDNA clone:006-201-D06, full insert sequence.
   
   0.792
A0A0P0V8Q8
Os01g0773000 protein.
   
   0.791
Q6L4W6_ORYSJ
cDNA clone:J013065A19, full insert sequence.
   
   0.791
Q0DLW3_ORYSJ
Os03g0843200 protein.
  
  
 0.771
Q0DHK1_ORYSJ
cDNA clone:J033125I20, full insert sequence; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.765
Q5N9V4_ORYSJ
cDNA clone:002-116-D07, full insert sequence; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.765
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.