STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q75KI1_ORYSJRNA polymerase II C-terminal domain phosphatase-like; This promotes the activity of RNA polymerase II. (536 aa)    
Predicted Functional Partners:
Q6YX88_ORYSJ
cDNA clone:006-305-H09, full insert sequence.
    
 0.948
Q10P09_ORYSJ
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.939
Q53QT1_ORYSJ
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.939
Q6ZGM1_ORYSJ
cDNA clone:J023131N03, full insert sequence.
    
 0.914
Q6ZA50_ORYSJ
cDNA clone:J013053F13, full insert sequence.
    
 0.905
Q5N8X8_ORYSJ
Os01g0772200 protein.
    
 0.877
Q6L4V9_ORYSJ
cDNA clone:J023147N17, full insert sequence.
    
 0.877
A0A0P0WG98
Os04g0675800 protein.
    
 0.843
A0A0P0WGE3
Os04g0675700 protein.
    
 0.843
A0A0P0WJH1
Os05g0224700 protein.
    
 0.843
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.