Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0P0V3B5 | A0A0P0V657 | A0A0P0V3B5 | A0A0P0V657 | Os01g0518300 protein. | Os01g0660500 protein. | 0.666 |
A0A0P0V3B5 | A0A0P0WS15 | A0A0P0V3B5 | A0A0P0WS15 | Os01g0518300 protein. | Os06g0111600 protein. | 0.989 |
A0A0P0V3B5 | NBS1 | A0A0P0V3B5 | Q7XD82 | Os01g0518300 protein. | Nijmegen breakage syndrome 1 protein; Component of the MRE11-RAD50-NBN complex (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex may be involved in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, and cell cycle checkpoint control. Functions also in the very early stages of meiosis. | 0.609 |
A0A0P0V3B5 | Q75KW3_ORYSJ | A0A0P0V3B5 | Q75KW3 | Os01g0518300 protein. | cDNA clone:002-172-E02, full insert sequence. | 0.550 |
A0A0P0V3B5 | Q7XHW1_ORYSJ | A0A0P0V3B5 | Q7XHW1 | Os01g0518300 protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.666 |
A0A0P0V657 | A0A0P0V3B5 | A0A0P0V657 | A0A0P0V3B5 | Os01g0660500 protein. | Os01g0518300 protein. | 0.666 |
A0A0P0V657 | NBS1 | A0A0P0V657 | Q7XD82 | Os01g0660500 protein. | Nijmegen breakage syndrome 1 protein; Component of the MRE11-RAD50-NBN complex (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex may be involved in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, and cell cycle checkpoint control. Functions also in the very early stages of meiosis. | 0.990 |
A0A0P0V657 | Q75KW3_ORYSJ | A0A0P0V657 | Q75KW3 | Os01g0660500 protein. | cDNA clone:002-172-E02, full insert sequence. | 0.624 |
A0A0P0V657 | Q7XHW1_ORYSJ | A0A0P0V657 | Q7XHW1 | Os01g0660500 protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.882 |
A0A0P0V657 | Q7XWV4_ORYSJ | A0A0P0V657 | Q7XWV4 | Os01g0660500 protein. | Os04g0271000 protein. | 0.830 |
A0A0P0WS15 | A0A0P0V3B5 | A0A0P0WS15 | A0A0P0V3B5 | Os06g0111600 protein. | Os01g0518300 protein. | 0.989 |
A0A0P0WS15 | NIA1 | A0A0P0WS15 | P16081 | Os06g0111600 protein. | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.590 |
A0A0P0WS15 | Q6ZC33_ORYSJ | A0A0P0WS15 | Q6ZC33 | Os06g0111600 protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.590 |
A0A0P0WS15 | Q6ZHH7_ORYSJ | A0A0P0WS15 | Q6ZHH7 | Os06g0111600 protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.590 |
A0A0P0WS15 | Q75KW3_ORYSJ | A0A0P0WS15 | Q75KW3 | Os06g0111600 protein. | cDNA clone:002-172-E02, full insert sequence. | 0.708 |
APR1 | NIA1 | Q6Z4A7 | P16081 | Probable 5'-adenylylsulfate reductase 1, chloroplastic; Reduces sulfate for Cys biosynthesis. | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.999 |
APR1 | Q6ZC33_ORYSJ | Q6Z4A7 | Q6ZC33 | Probable 5'-adenylylsulfate reductase 1, chloroplastic; Reduces sulfate for Cys biosynthesis. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.999 |
APR1 | Q6ZHH7_ORYSJ | Q6Z4A7 | Q6ZHH7 | Probable 5'-adenylylsulfate reductase 1, chloroplastic; Reduces sulfate for Cys biosynthesis. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.999 |
APR1 | Q75KW3_ORYSJ | Q6Z4A7 | Q75KW3 | Probable 5'-adenylylsulfate reductase 1, chloroplastic; Reduces sulfate for Cys biosynthesis. | cDNA clone:002-172-E02, full insert sequence. | 0.873 |
NBS1 | A0A0P0V3B5 | Q7XD82 | A0A0P0V3B5 | Nijmegen breakage syndrome 1 protein; Component of the MRE11-RAD50-NBN complex (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex may be involved in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, and cell cycle checkpoint control. Functions also in the very early stages of meiosis. | Os01g0518300 protein. | 0.609 |
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