STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q75LI3_ORYSJOs03g0834050 protein. (278 aa)    
Predicted Functional Partners:
A0A0P0V8H7
Os01g0757900 protein.
  
 0.967
URH2
Probable uridine nucleosidase 2; Involved in pyrimidine breakdown.
  
 
 0.919
URH1
Probable uridine nucleosidase 1; Involved in pyrimidine breakdown.
  
 
 0.919
A0A0P0XT88
Os10g0209300 protein.
  
 0.910
GLN
HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed.
  
 0.910
A0A0P0XLS3
Os09g0347900 protein.
    
 0.904
OJ1293_E04.25
Nicotinamide/nicotinic acid mononucleotide adenylyltransferase; Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated form; nicotinic acid mononucleotide (NaMN) as substrate. Belongs to the eukaryotic NMN adenylyltransferase family.
    
 0.904
A0A0P0W0Q3
Os03g0611000 protein.
    
 0.899
Q84MH2_ORYSJ
Inosine-uridine preferring nucleoside hydrolase family protein, expressed.
  
 
 0.890
B9FF83_ORYSJ
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
 
 0.888
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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