STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q7F1K4_ORYSJP53 binding protein-like. (347 aa)    
Predicted Functional Partners:
A0A0P0VFD5
Os02g0167500 protein.
    
 0.757
B9EW84_ORYSJ
Os01g0338100 protein.
   
 0.725
A0A0P0X3D9
Os07g0205200 protein.
    
  0.716
Q67UR9_ORYSJ
Os06g0649500 protein.
    
  0.716
Q10IZ0_ORYSJ
Transcription initiation factor TFIID component TAF4 family protein, expressed.
   
  0.712
Q6H7I0_ORYSJ
cDNA clone:J023007I15, full insert sequence.
   
  0.712
Q0JHK4_ORYSJ
Os01g0858500 protein.
   
  0.710
Q5N796_ORYSJ
Os01g0846900 protein.
   
  0.710
Q5QMA1_ORYSJ
cDNA clone:J013126J05, full insert sequence.
    
  0.707
Q6YX88_ORYSJ
cDNA clone:006-305-H09, full insert sequence.
    
 0.697
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.