STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q7F1U0_ORYSJPeroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (317 aa)    
Predicted Functional Partners:
C7J1U6_ORYSJ
Os04g0589400 protein.
   
 0.816
Q84PV5_ORYSJ
Os08g0158400 protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
   
  0.646
CAD2
Cinnamyl alcohol dehydrogenase 2; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde and sinapaldehyde to their respective alcohols. Plays the major role in monolignol biosynthesis. Functions cooperatively with COMT in the culm internodes for the biosynthesis of monolignols, the lignin precursors. May be involved in lignin biosynthesis in leaves and roots. Belongs to the zinc-containing alcohol dehydrogenase family.
    
  0.631
A0A0P0XQE9
Os09g0512450 protein.
    
 0.579
Q6K9N9_ORYSJ
cDNA clone:J023012G01, full insert sequence.
    
 0.579
A0A0P0WLY1
Os05g0392000 protein.
   
  0.567
A0A0P0WM13
Os05g0392050 protein.
   
  0.567
A0A0P0V1T6
Os01g0314700 protein.
    
 0.542
Q2R7H8_ORYSJ
TPR Domain containing protein, expressed.
    
 0.532
Q5QLI4_ORYSJ
cDNA clone:002-175-D06, full insert sequence.
    
 0.527
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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