STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q7FAN9_ORYSJOs04g0678300 protein. (819 aa)    
Predicted Functional Partners:
Q8H033_ORYSJ
cDNA clone:002-100-D01, full insert sequence.
  
     0.456
A0A0P0WBW4
Os04g0481600 protein.
  
     0.453
A0A0P0WGJ2
Os04g0679050 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.435
Q7XPW6_ORYSJ
cDNA clone:J023060G05, full insert sequence.
      
 0.435
Q7XPX3_ORYSJ
cDNA clone:001-113-E05, full insert sequence; Belongs to the CTL (choline transporter-like) family.
      
 0.435
B7EM10_ORYSJ
cDNA clone:J033028L15, full insert sequence.
      
 0.432
Q0DTR1_ORYSJ
Os03g0231800 protein.
      
 0.432
Q0J0L8_ORYSJ
cDNA clone:J013112C23, full insert sequence.
      
 0.432
Q10PK5_ORYSJ
Squalene monooxygenase, putative, expressed.
      
 0.432
Q8S5X6_ORYSJ
cDNA clone:J023021I18, full insert sequence.
      
 0.432
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.