STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nad9NADH dehydrogenase subunit 9; Belongs to the complex I 30 kDa subunit family. (190 aa)    
Predicted Functional Partners:
Q8H2T7_ORYSJ
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
  
 0.999
nad7
NADH dehydrogenase subunit 7; Belongs to the complex I 49 kDa subunit family.
 
 0.999
nad1
NADH-ubiquinone oxidoreductase chain 1; Belongs to the complex I subunit 1 family.
  
 0.999
Q0DVH3_ORYSJ
Os03g0129900 protein.
   
 0.998
Q0IVE4_ORYSJ
Os10g0576000 protein.
   
 0.998
Q10MU1_ORYSJ
cDNA, clone: J065024G23, full insert sequence.
   
 0.998
Q10QL6_ORYSJ
cDNA clone:J023056B01, full insert sequence.
   
 0.998
Q69WE3_ORYSJ
Os07g0585800 protein.
   
 0.998
Q6L4W7_ORYSJ
cDNA clone:006-311-E10, full insert sequence.
  
 0.998
Q7XBT1_ORYSJ
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.998
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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