STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q7X6X5_ORYSJcDNA clone:001-015-E04, full insert sequence. (347 aa)    
Predicted Functional Partners:
A0A0P0WJR7
Os05g0248901 protein.
    
 0.704
A0A0P0WJU2
Os05g0249800 protein.
    
 0.704
A0A0P0WJV4
Os05g0248600 protein.
    
 0.704
A0A0P0WND8
Os05g0467400 protein.
    
 0.704
A0A0P0WNE8
Os05g0467501 protein.
    
 0.704
A0A0P0WNH9
Os05g0468400 protein.
    
 0.704
Q5JKU5_ORYSJ
cDNA clone:001-115-C05, full insert sequence.
    
 0.704
Q6H4L2_ORYSJ
Os02g0519900 protein.
    
 0.704
Q6I5S0_ORYSJ
Os05g0468200 protein.
    
 0.704
Q6I5S1_ORYSJ
cDNA clone:J033037O09, full insert sequence.
    
 0.704
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.