STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q7XE36_ORYSJZinc finger, C3HC4 type family protein, expressed. (133 aa)    
Predicted Functional Partners:
A0A0P0XWX4
Os10g0546900 protein.
  
  
  0.682
A0A0N7KFJ0
Os02g0572300 protein.
  
  
  0.658
A0A0P0WTV7
Os06g0187300 protein.
  
  
  0.649
A0A0P0VZ59
Os03g0391100 protein.
  
  
  0.616
Q84LH7_ORYSJ
Brefeldin A-sensitive Golgi protein, putative, expressed.
    
  0.591
A0A0P0YC54
Os12g0620100 protein.
  
  
 
0.574
A0A0P0VKM5
Os02g0561900 protein.
  
  
 
0.571
Q336R1_ORYSJ
Zinc finger, C3HC4 type family protein, expressed.
  
  
 
0.571
A0A0P0V3L8
Os01g0535300 protein.
    
  0.565
Q7XT61_ORYSJ
cDNA clone:001-023-B01, full insert sequence.
  
  
 
0.565
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.