STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OsJ_029934Beta-galactosidase 14; Belongs to the glycosyl hydrolase 35 family. (808 aa)    
Predicted Functional Partners:
Q9LGI8_ORYSJ
cDNA clone:J013123E12, full insert sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.753
Q5JKZ9_ORYSJ
Os01g0952600 protein; Belongs to the glycosyl hydrolase 2 family.
  
 0.693
B9FSC3_ORYSJ
Os06g0232200 protein; Belongs to the carbohydrate kinase PfkB family.
     
 0.612
Q0DZE5_ORYSJ
Os02g0625500 protein.
     
 0.612
FRK2
Fructokinase-2; May play an important role in maintaining the flux of carbon towards starch formation in endosperm. May also be involved in a sugar- sensing pathway; Belongs to the carbohydrate kinase PfkB family.
     
 0.612
Q0JBQ0_ORYSJ
Os04g0518000 protein.
     
 0.612
FRK1
Fructokinase-1; Fructokinase that may play an important role in maintaining the flux of carbon towards starch formation. May also be involved in a sugar-sensing pathway.
     
 0.612
Q5N7A1_ORYSJ
cDNA clone:J013000K08, full insert sequence.
     
 0.612
Q5SN59_ORYSJ
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
     
 0.612
Q657Z1_ORYSJ
Os01g0105900 protein.
     
 0.612
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.