STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S1FA2DNA-binding protein S1FA2; DNA-binding protein that specifically recognizes a negative element (S1F) within the RPS1 promoter; Belongs to the S1FA transcription factor family. (80 aa)    
Predicted Functional Partners:
Q9LWD2_ORYSJ
cDNA clone:001-104-E12, full insert sequence.
   
 0.944
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.934
Q851P5_ORYSJ
40S ribosomal protein S15, putative, expressed; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.934
RPL27
50S ribosomal protein L27, chloroplastic; Belongs to the bacterial ribosomal protein bL27 family.
  
 0.925
Q7XAM9_ORYSJ
cDNA clone:J023022A05, full insert sequence; Belongs to the universal ribosomal protein uS9 family.
  
 0.923
rps9
30S ribosomal protein S9, chloroplast, putative, expressed; Belongs to the universal ribosomal protein uS9 family.
  
 0.923
Q65XC5_ORYSJ
cDNA clone:J023015G24, full insert sequence.
   
 0.922
Q6KA00_ORYSJ
cDNA clone:001-014-G04, full insert sequence.
   
 0.922
Q5VPH3_ORYSJ
cDNA clone:006-204-C10, full insert sequence.
  
  
 0.917
A0A0N7KRK6
Os10g0214132 protein.
   
 0.912
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.