STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q7XMP9_ORYSJcDNA clone:006-312-B03, full insert sequence. (293 aa)    
Predicted Functional Partners:
Q0JNR7_ORYSJ
Os01g0269100 protein.
   
 
  0.726
Q0DJB7_ORYSJ
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
     
 0.686
Q10NA3_ORYSJ
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
     
 0.686
Q688K0_ORYSJ
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
     
 0.686
Q8LIL4_ORYSJ
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
     
 0.686
Q0DGE4_ORYSJ
cDNA clone:001-102-H02, full insert sequence.
     
 0.668
Q5JLU1_ORYSJ
cDNA clone:J013000E15, full insert sequence.
     
 0.668
Q5N7Z9_ORYSJ
cDNA clone:006-211-E06, full insert sequence.
     
 0.668
Q75IJ1_ORYSJ
cDNA clone:001-040-A09, full insert sequence.
     
 0.668
A0A0N7KIL7
Os04g0182600 protein.
    
  0.634
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.