STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAEH3_ORYSJProbable inactive carboxylesterase Os04g0669700; Belongs to the AB hydrolase superfamily. AB hydrolase 2 family. (245 aa)    
Predicted Functional Partners:
A0A0P0XIP2
Os08g0535700 protein.
    
 0.851
C7J6H5_ORYSJ
Os09g0513100 protein.
     
 0.845
Q7XTS6_ORYSJ
cDNA clone:J023027J22, full insert sequence.
     
 0.845
Q5JMS5_ORYSJ
cDNA clone:001-203-D08, full insert sequence.
    
   0.758
FAS2
Chromatin assembly factor 1 subunit FAS2 homolog; Component of the chromatin assembly factor complex (CAF-1) involved in chromatin assembly following DNA replication and DNA repair. Required for several aspects of development, including apical meristem maintenance by regulating the durations of the S- and G2- phases of the cell cycle through its chromatin assembly activity (By similarity).
    
 
 0.715
A0A0P0VJM6
Os02g0514500 protein.
    
 0.702
A0A0P0W9Q9
Os04g0394100 protein.
    
 0.702
A0A0P0V8Q4
Os01g0773200 protein.
     
 0.682
A0A0P0WR56
Os05g0588100 protein.
  
  
 
0.641
A0A0P0X8I7
Os07g0602800 protein.
    
 0.640
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.