STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MUB4Membrane-anchored ubiquitin-fold protein 4; May serve as docking site to facilitate the association of other proteins to the plasma membrane. (135 aa)    
Predicted Functional Partners:
Q6Z667_ORYSJ
Os02g0721200 protein.
   
   0.672
A0A0P0V9Q4
Os01g0819400 protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.666
A0A0P0VP46
Os02g0721500 protein.
    
   0.666
Q0JI73_ORYSJ
Os01g0819500 protein.
    
   0.666
UBC5A
Ubiquitin-conjugating enzyme E2 5A; E2 conjugating enzyme that associates with the E3 ubiquitin- protein ligase EL5 to mediates ubiquitination of target proteins.
    
   0.666
Q69JN7_ORYSJ
cDNA clone:001-030-H11, full insert sequence; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.584
Q6Z668_ORYSJ
Os02g0721100 protein.
    
   0.584
Q6Z6G7_ORYSJ
cDNA clone:J033150B14, full insert sequence; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
      
 0.474
Q5JLH9_ORYSJ
Os01g0534800 protein.
      
 0.450
Q5KQI2_ORYSJ
cDNA clone:001-122-A02, full insert sequence.
      
 0.449
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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