STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q7XTM8_ORYSJcDNA clone:J013127A03, full insert sequence. (392 aa)    
Predicted Functional Partners:
A0A0P0WS15
Os06g0111600 protein.
    
 0.742
Q6ZFI6_ORYSJ
cDNA clone:J013000A23, full insert sequence.
     
 0.720
A0A0P0VHG4
Os02g0276400 protein.
  
 0.705
A0A0P0VHI0
Os02g0276200 protein.
  
 0.705
Q10MD1_ORYSJ
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.694
Q2QWT8_ORYSJ
2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial, putative, expressed.
  
 0.694
A0A0P0XT12
Os10g0190800 protein.
  
 
 0.691
Q10CU7_ORYSJ
Inosine-5'-monophosphate dehydrogenase; Belongs to the IMPDH/GMPR family.
   
 0.686
Q2R3H6_ORYSJ
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.681
A0A0P0WW94
Os06g0346300 protein.
   
 0.670
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.