STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIP1_ORYSJPutative ripening-related protein 1. (183 aa)    
Predicted Functional Partners:
Q67V89_ORYSJ
cDNA clone:J013072F13, full insert sequence.
  
     0.508
Q8S7V1_ORYSJ
TPR Domain containing protein.
  
     0.437
Q8RU06_ORYSJ
cDNA clone:J013001E03, full insert sequence; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.435
Q6H672_ORYSJ
cDNA clone:002-130-B07, full insert sequence.
  
     0.423
Q67UR5_ORYSJ
Os06g0649900 protein.
  
     0.420
A0A0P0Y7N1
Os12g0177800 protein.
  
     0.418
Q5W708_ORYSJ
Os05g0244500 protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.408
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.